Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 BEND3P1-201ENST00000421591 1944 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 ECEL1P3-201ENST00000427961 737 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AC128688.1-201ENST00000487626 519 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 MPDU1-223ENST00000582151 728 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AP001412.1-201ENST00000608405 714 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AC073592.5-201ENST00000624854 528 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 AL359183.1-201ENST00000623796 2132 ntBASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 KRT8P44-201ENST00000441609 1350 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 MIR662-201ENST00000384847 95 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 ZNF444P1-201ENST00000559497 298 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 LINC01238-205ENST00000567549 1107 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AL390719.2-201ENST00000606993 987 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 FAM87A-204ENST00000613235 858 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AL590326.2-201ENST00000625139 305 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AL049637.2-201ENST00000641778 930 ntBASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
SLIRPQ9GZT3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms