Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC026954.1-201ENST00000429771 1293 ntBASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC016694.1-201ENST00000434179 700 ntBASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC000095.1-201ENST00000603208 874 ntBASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 RHOXF1P1-202ENST00000635473 501 ntBASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC134312.5-201ENST00000568031 1313 ntBASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 HLA-A-202ENST00000376806 1854 ntBASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 GPAA1P2-201ENST00000417923 928 ntBASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC136604.1-201ENST00000418535 575 ntBASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC010328.2-201ENST00000597698 1111 ntBASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP4Q9C0A0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 AC093433.1-201ENST00000458048 571 ntBASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 MIR3615-201ENST00000581999 87 ntBASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP4Q9C0A0 AC009053.2-201ENST00000563701 2365 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms