Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC3Q9BY71 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC3Q9BY71 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 AC078925.2-201ENST00000624013 1973 ntBASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 GK-202ENST00000378941 458 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 TNRC18P3-201ENST00000441896 2691 ntBASIC16.97■□□□□ 0.31
LRRC3Q9BY71 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.97■□□□□ 0.31
LRRC3Q9BY71 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 RNF216P1-203ENST00000404404 2427 ntBASIC16.97■□□□□ 0.31
LRRC3Q9BY71 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3Q9BY71 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 LINC01144-201ENST00000626198 1710 ntBASIC16.96■□□□□ 0.31
LRRC3Q9BY71 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 SERBP1P3-201ENST00000459980 809 ntBASIC16.96■□□□□ 0.31
LRRC3Q9BY71 MEIS3P1-201ENST00000495167 958 ntBASIC16.96■□□□□ 0.31
LRRC3Q9BY71 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3Q9BY71 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LRRC3Q9BY71 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 U82695.1-201ENST00000635752 1889 ntBASIC16.95■□□□□ 0.3
LRRC3Q9BY71 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LRRC3Q9BY71 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms