Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 HAUS4P1-201ENST00000406739 1145 ntBASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 MIR4321-201ENST00000592276 80 ntBASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
RSPO3Q9BXY4 AC018892.3-201ENST00000623986 2499 ntBASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AC020658.6-201ENST00000623564 1870 ntBASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 WASH6P-202ENST00000359512 1437 ntBASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 PDPK2P-202ENST00000562415 1191 ntBASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO3Q9BXY4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms