Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK1Q99986 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK1Q99986 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
VRK1Q99986 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
VRK1Q99986 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 NORAD-201ENST00000565493 5339 ntBASIC14.52□□□□□ -0.08
VRK1Q99986 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.52□□□□□ -0.08
VRK1Q99986 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.52□□□□□ -0.08
VRK1Q99986 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
VRK1Q99986 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
VRK1Q99986 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
VRK1Q99986 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK1Q99986 AC129492.6-201ENST00000611383 1305 ntBASIC14.52□□□□□ -0.08
VRK1Q99986 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK1Q99986 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK1Q99986 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.52□□□□□ -0.09
VRK1Q99986 FAM58CP-201ENST00000435741 640 ntBASIC14.52□□□□□ -0.09
VRK1Q99986 PAWRP1-201ENST00000451083 565 ntBASIC14.52□□□□□ -0.09
VRK1Q99986 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK1Q99986 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK1Q99986 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.52□□□□□ -0.09
VRK1Q99986 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK1Q99986 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK1Q99986 LINC02012-201ENST00000608206 1725 ntBASIC14.52□□□□□ -0.09
VRK1Q99986 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VRK1Q99986 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK1Q99986 AL365209.1-201ENST00000624418 6473 ntBASIC14.52□□□□□ -0.09
VRK1Q99986 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK1Q99986 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK1Q99986 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 RNF216P1-203ENST00000404404 2427 ntBASIC14.51□□□□□ -0.09
VRK1Q99986 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.51□□□□□ -0.09
VRK1Q99986 FAM185BP-201ENST00000443595 716 ntBASIC14.51□□□□□ -0.09
VRK1Q99986 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK1Q99986 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK1Q99986 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK1Q99986 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK1Q99986 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK1Q99986 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VRK1Q99986 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VRK1Q99986 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK1Q99986 TCAF2P1-201ENST00000291129 2421 ntBASIC14.51□□□□□ -0.09
VRK1Q99986 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms