Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.07■□□□□ 0.16
NPAS2Q99743 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NPAS2Q99743 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.07■□□□□ 0.16
NPAS2Q99743 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.07■□□□□ 0.16
NPAS2Q99743 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 AC027601.4-201ENST00000611259 610 ntBASIC16.07■□□□□ 0.16
NPAS2Q99743 MIR1199-201ENST00000621445 119 ntBASIC16.07■□□□□ 0.16
NPAS2Q99743 PMS2P7-201ENST00000506558 1336 ntBASIC16.07■□□□□ 0.16
NPAS2Q99743 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NPAS2Q99743 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NPAS2Q99743 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NPAS2Q99743 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS2Q99743 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 SNX33P1-201ENST00000592116 1762 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 MED15P5-201ENST00000423150 992 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NPAS2Q99743 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.06■□□□□ 0.16
NPAS2Q99743 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 AL139424.1-201ENST00000607572 797 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 FAM197Y3-203ENST00000618346 717 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 AC005593.1-201ENST00000624894 515 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 PRAL-201ENST00000624952 3286 ntBASIC16.06■□□□□ 0.16
NPAS2Q99743 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.06■□□□□ 0.16
NPAS2Q99743 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAS2Q99743 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAS2Q99743 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS2Q99743 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS2Q99743 AC007967.2-201ENST00000432613 625 ntBASIC16.05■□□□□ 0.16
NPAS2Q99743 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
NPAS2Q99743 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS2Q99743 AC006538.3-201ENST00000612495 578 ntBASIC16.05■□□□□ 0.16
NPAS2Q99743 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS2Q99743 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS2Q99743 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms