Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
TRGV9Q99603 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV9Q99603 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV9Q99603 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV9Q99603 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV9Q99603 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRGV9Q99603 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV9Q99603 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
TRGV9Q99603 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV9Q99603 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRGV9Q99603 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TRGV9Q99603 AC016027.1-202ENST00000607927 1699 ntBASIC12.77□□□□□ -0.36
TRGV9Q99603 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV9Q99603 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV9Q99603 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV9Q99603 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV9Q99603 FAM185BP-201ENST00000443595 716 ntBASIC12.77□□□□□ -0.37
TRGV9Q99603 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV9Q99603 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV9Q99603 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.77□□□□□ -0.37
TRGV9Q99603 AL031055.1-201ENST00000606362 631 ntBASIC12.77□□□□□ -0.37
TRGV9Q99603 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV9Q99603 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV9Q99603 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TRGV9Q99603 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV9Q99603 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV9Q99603 AC092919.2-201ENST00000623631 1645 ntBASIC12.77□□□□□ -0.37
TRGV9Q99603 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.76□□□□□ -0.37
TRGV9Q99603 ACTL9-202ENST00000612068 1252 ntBASIC12.76□□□□□ -0.37
TRGV9Q99603 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 AL645728.2-201ENST00000641974 660 ntBASIC12.76□□□□□ -0.37
TRGV9Q99603 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 AC008677.1-201ENST00000519230 1561 ntBASIC12.76□□□□□ -0.37
TRGV9Q99603 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 HYMAI-201ENST00000635591 3347 ntBASIC12.76□□□□□ -0.37
TRGV9Q99603 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.76□□□□□ -0.37
TRGV9Q99603 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRGV9Q99603 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRGV9Q99603 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRGV9Q99603 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms