Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 ALOX12P2-203ENST00000570921 1945 ntBASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 AL136982.4-201ENST00000437689 1740 ntBASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 API5-211ENST00000534695 560 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC85AQ96PX6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 SPDYE19P-201ENST00000338590 713 ntBASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC85AQ96PX6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CCDC85AQ96PX6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms