Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 LINC02447-202ENST00000501888 2146 ntBASIC16.89■□□□□ 0.29
C9orf72Q96LT7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 AL589182.2-201ENST00000619332 1049 ntBASIC16.89■□□□□ 0.29
C9orf72Q96LT7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 LINC01144-201ENST00000626198 1710 ntBASIC16.89■□□□□ 0.29
C9orf72Q96LT7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AP002414.3-201ENST00000589352 1468 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 POU5F1P6-201ENST00000466990 990 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 POLD2P1-201ENST00000511220 997 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 RNA5SP415-201ENST00000517246 115 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AC006557.2-201ENST00000592985 1240 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AC112504.1-201ENST00000623415 1841 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf72Q96LT7 AP003680.1-201ENST00000598970 3660 ntBASIC16.88■□□□□ 0.29
C9orf72Q96LT7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms