Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC011498.5-201ENST00000592027 486 ntBASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 AC092919.2-201ENST00000623631 1645 ntBASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 AL138831.2-201ENST00000606564 490 ntBASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CHMP6Q96FZ7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CHMP6Q96FZ7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 FAM210CP-201ENST00000445714 574 ntBASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 AL592071.1-201ENST00000611956 408 ntBASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 CICP4-201ENST00000447359 2812 ntBASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP6Q96FZ7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AP003680.1-201ENST00000598970 3660 ntBASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 BX276092.5-203ENST00000456199 560 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms