Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPGRQ92834 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPGRQ92834 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.96■□□□□ 0.79
RPGRQ92834 KRT43P-201ENST00000434019 910 ntBASIC19.96■□□□□ 0.79
RPGRQ92834 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.96■□□□□ 0.79
RPGRQ92834 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 AC104989.1-201ENST00000519711 778 ntBASIC19.96■□□□□ 0.79
RPGRQ92834 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.96■□□□□ 0.79
RPGRQ92834 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPGRQ92834 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.96■□□□□ 0.79
RPGRQ92834 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.96■□□□□ 0.79
RPGRQ92834 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPGRQ92834 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPGRQ92834 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPGRQ92834 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPGRQ92834 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.96■□□□□ 0.79
RPGRQ92834 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPGRQ92834 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
RPGRQ92834 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RPGRQ92834 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RPGRQ92834 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRQ92834 RN7SL399P-201ENST00000471648 279 ntBASIC19.95■□□□□ 0.78
RPGRQ92834 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRQ92834 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRQ92834 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRQ92834 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRQ92834 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRQ92834 AC036164.1-201ENST00000570544 333 ntBASIC19.95■□□□□ 0.78
RPGRQ92834 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRQ92834 BTNL10-201ENST00000595971 695 ntBASIC19.95■□□□□ 0.78
RPGRQ92834 LINC01115-203ENST00000606068 577 ntBASIC19.95■□□□□ 0.78
RPGRQ92834 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRQ92834 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRQ92834 REXO1L6P-201ENST00000603433 1515 ntBASIC19.95■□□□□ 0.78
RPGRQ92834 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RPGRQ92834 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRQ92834 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRQ92834 Z97205.2-201ENST00000564697 1639 ntBASIC19.94■□□□□ 0.78
RPGRQ92834 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RPGRQ92834 FZD10-202ENST00000539839 3282 ntBASIC19.94■□□□□ 0.78
RPGRQ92834 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.94■□□□□ 0.78
RPGRQ92834 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRQ92834 GGT3P-204ENST00000453783 1664 ntBASIC19.94■□□□□ 0.78
RPGRQ92834 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRQ92834 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRQ92834 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RPGRQ92834 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRQ92834 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.93■□□□□ 0.78
RPGRQ92834 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RPGRQ92834 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms