Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX1Q92499 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
DDX1Q92499 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.36■□□□□ 0.37
DDX1Q92499 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.36■□□□□ 0.37
DDX1Q92499 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.36■□□□□ 0.37
DDX1Q92499 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.36■□□□□ 0.37
DDX1Q92499 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 Z92544.3-201ENST00000624747 417 ntBASIC17.36■□□□□ 0.37
DDX1Q92499 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 AKAP8P1-201ENST00000434743 1349 ntBASIC17.36■□□□□ 0.37
DDX1Q92499 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.36■□□□□ 0.37
DDX1Q92499 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.36■□□□□ 0.37
DDX1Q92499 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX1Q92499 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.36■□□□□ 0.37
DDX1Q92499 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX1Q92499 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
DDX1Q92499 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
DDX1Q92499 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
DDX1Q92499 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DDX1Q92499 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.35■□□□□ 0.37
DDX1Q92499 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.35■□□□□ 0.37
DDX1Q92499 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 AL671277.1-201ENST00000429656 993 ntBASIC17.35■□□□□ 0.37
DDX1Q92499 FAM58CP-201ENST00000435741 640 ntBASIC17.35■□□□□ 0.37
DDX1Q92499 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 AC069262.1-201ENST00000539058 672 ntBASIC17.35■□□□□ 0.37
DDX1Q92499 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.35■□□□□ 0.37
DDX1Q92499 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.35■□□□□ 0.37
DDX1Q92499 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.35■□□□□ 0.37
DDX1Q92499 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX1Q92499 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX1Q92499 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 TFAMP1-201ENST00000412727 736 ntBASIC17.34■□□□□ 0.37
DDX1Q92499 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DDX1Q92499 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX1Q92499 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms