Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 POR-209ENST00000439269 1858 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AC103810.10-201ENST00000606504 343 ntBASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AL671710.1-201ENST00000610245 2349 ntBASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AL032819.2-201ENST00000624543 2162 ntBASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AC004987.2-201ENST00000395959 1148 ntBASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE2Q8WXH0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL451007.2-201ENST00000632004 563 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC004910.1-201ENST00000433493 787 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC012073.1-201ENST00000606114 1108 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL096828.2-201ENST00000567259 1965 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 GHSR-202ENST00000427970 912 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC092580.1-201ENST00000433998 658 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL360270.3-201ENST00000609118 1348 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 CISD2-202ENST00000503643 808 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC084752.1-201ENST00000509766 622 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 AC006986.1-201ENST00000612764 241 ntBASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE2Q8WXH0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms