Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-3Q8TAU0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 FAM220BP-201ENST00000377689 816 ntBASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-3Q8TAU0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 MRPS18AP1-201ENST00000414458 589 ntBASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-3Q8TAU0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 TNRC18P3-201ENST00000441896 2691 ntBASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 AL596087.1-201ENST00000400979 1969 ntBASIC19.21■□□□□ 0.67
NKX2-3Q8TAU0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms