Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 AL592424.1-201ENST00000563624 1536 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 REXO1L8P-201ENST00000604378 1897 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 MIR346-201ENST00000362234 95 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AC005237.2-201ENST00000434368 219 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AC098859.1-201ENST00000502915 1238 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AC084121.4-201ENST00000641598 221 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AC079781.4-201ENST00000641908 219 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AF228730.8-201ENST00000642140 221 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AL162727.3-201ENST00000635661 2787 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 UXT-AS1-201ENST00000590504 1525 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AL589702.1-201ENST00000641229 1509 ntBASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC148Q8NFR7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC148Q8NFR7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 AC006449.5-201ENST00000610658 2098 ntBASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 AC006449.6-201ENST00000612330 2296 ntBASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC148Q8NFR7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms