Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 HNRNPUP1-201ENST00000554987 333 ntBASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AC007551.1-201ENST00000457394 519 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AC104596.2-201ENST00000512793 793 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 DUX4L45-201ENST00000566406 1057 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 RN7SL190P-201ENST00000582519 257 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 BRI3BPP1-201ENST00000594224 787 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 RNF165-205ENST00000588679 2904 ntBASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CFAP43Q8NDM7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFAP43Q8NDM7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CFAP43Q8NDM7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC25.08■■□□□ 1.6
CFAP43Q8NDM7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC25.08■■□□□ 1.6
CFAP43Q8NDM7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFAP43Q8NDM7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 SLC25A47P1-201ENST00000531577 414 ntBASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 COG4-212ENST00000564653 590 ntTSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 AC036164.1-201ENST00000570544 333 ntBASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 AC106886.4-201ENST00000623557 2502 ntBASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CFAP43Q8NDM7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 ALOX12P2-203ENST00000570921 1945 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 Z97205.2-201ENST00000564697 1639 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AC092171.3-201ENST00000610122 2651 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 IGHJ2P-201ENST00000454480 60 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AP000812.2-201ENST00000538934 718 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AC011676.5-201ENST00000624864 2660 ntBASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP43Q8NDM7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms