Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 RPSAP43-201ENST00000402237 625 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 BX842568.4-201ENST00000421222 227 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 AC099522.2-201ENST00000607001 744 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 AC091812.2-201ENST00000619081 385 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 AC092902.6-201ENST00000641783 218 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PCDHB19P-201ENST00000570871 2371 ntBASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 GPX1P2-201ENST00000429271 606 ntBASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 MKNK2P1-201ENST00000437526 628 ntBASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 AC023511.2-201ENST00000618803 211 ntBASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 AL031731.1-201ENST00000642131 2094 ntBASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
C11orf42Q8N5U0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms