Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 AC068137.2-201ENST00000605408 478 ntBASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 U82695.1-201ENST00000635752 1889 ntBASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AL596087.1-201ENST00000400979 1969 ntBASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 REXO1L8P-201ENST00000604378 1897 ntBASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AC002056.1-201ENST00000395613 760 ntBASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AL078644.1-201ENST00000609881 752 ntBASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.96□□□□□ -0.33
TTC9CQ8N5M4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 AC079328.2-201ENST00000561241 3354 ntBASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TTC9CQ8N5M4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 AL592424.1-201ENST00000563624 1536 ntBASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms