Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS52Q8N1B4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AC106886.4-201ENST00000623557 2502 ntBASIC17.73■□□□□ 0.43
VPS52Q8N1B4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AP005018.1-201ENST00000525475 301 ntBASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AC007967.4-201ENST00000614700 386 ntBASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SPDYE12P-201ENST00000618416 771 ntBASIC17.73■□□□□ 0.43
VPS52Q8N1B4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.73■□□□□ 0.43
VPS52Q8N1B4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
VPS52Q8N1B4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 TSSK5P-201ENST00000423978 907 ntBASIC17.72■□□□□ 0.43
VPS52Q8N1B4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 GAPDHP21-201ENST00000450301 1010 ntBASIC17.72■□□□□ 0.43
VPS52Q8N1B4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 FLJ16779-201ENST00000612722 7638 ntBASIC17.72■□□□□ 0.43
VPS52Q8N1B4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS52Q8N1B4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AC092053.1-201ENST00000605787 1936 ntBASIC17.71■□□□□ 0.43
VPS52Q8N1B4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.71■□□□□ 0.43
VPS52Q8N1B4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms