Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 CROCCP2-202ENST00000412962 2773 ntBASIC17.6■□□□□ 0.41
HERC6Q8IVU3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 AC093724.1-201ENST00000448659 1027 ntBASIC17.6■□□□□ 0.41
HERC6Q8IVU3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 AC092337.1-201ENST00000568699 1129 ntBASIC17.6■□□□□ 0.41
HERC6Q8IVU3 MIR8072-201ENST00000614241 80 ntBASIC17.6■□□□□ 0.41
HERC6Q8IVU3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 AL589702.1-201ENST00000641229 1509 ntBASIC17.6■□□□□ 0.41
HERC6Q8IVU3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 SNX33P1-201ENST00000592116 1762 ntBASIC17.59■□□□□ 0.41
HERC6Q8IVU3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 AC124067.4-201ENST00000519691 2379 ntBASIC17.59■□□□□ 0.41
HERC6Q8IVU3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC6Q8IVU3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC6Q8IVU3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 ACTBP11-201ENST00000436287 1126 ntBASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms