Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 AC079776.4-201ENST00000511039 504 ntBASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 Z83851.2-201ENST00000609564 659 ntBASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 AC063926.3-201ENST00000624734 5658 ntBASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 NORAD-201ENST00000565493 5339 ntBASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00346Q8IVM7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AP003680.1-201ENST00000598970 3660 ntBASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AC018845.2-201ENST00000568326 409 ntBASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms