Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC022494.1-201ENST00000466044 728 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 POU5F1P6-201ENST00000466990 990 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 RN7SL399P-201ENST00000471648 279 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 AL645608.8-201ENST00000606034 2086 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC119751.2-201ENST00000504529 210 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC036164.1-201ENST00000570544 333 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 RNF165-205ENST00000588679 2904 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AL691432.1-201ENST00000596308 1422 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 LINC01115-203ENST00000606068 577 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AL391069.4-201ENST00000609583 481 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 AC133552.6-201ENST00000613406 534 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 COX11-210ENST00000639671 696 ntBASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS4Q8IUM7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 HLA-A-202ENST00000376806 1854 ntBASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NPAS4Q8IUM7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 KRT223P-202ENST00000449164 1292 ntBASIC17.33■□□□□ 0.36
NPAS4Q8IUM7 AC245100.5-201ENST00000452108 331 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms