Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC007967.2-201ENST00000432613 625 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC064836.3-201ENST00000607928 673 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC004877.2-201ENST00000623941 599 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 HYMAI-201ENST00000635591 3347 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 AC112504.1-201ENST00000623415 1841 ntBASIC15.13■□□□□ 0.01
VRK2Q86Y07 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 KRT18P2-201ENST00000447938 1258 ntBASIC15.13■□□□□ 0.01
VRK2Q86Y07 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 AC145285.3-201ENST00000564603 959 ntBASIC15.13■□□□□ 0.01
VRK2Q86Y07 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 PRAL-201ENST00000624952 3286 ntBASIC15.13■□□□□ 0.01
VRK2Q86Y07 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK2Q86Y07 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK2Q86Y07 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 AC069224.1-201ENST00000566372 1715 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms