Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AC005622.1-201ENST00000636801 1703 ntBASIC18.18■□□□□ 0.5
TRIM50Q86XT4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AC024267.1-201ENST00000582320 895 ntBASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AC004233.3-201ENST00000607794 1269 ntBASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AC004790.1-201ENST00000612686 536 ntBASIC18.17■□□□□ 0.5
TRIM50Q86XT4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM50Q86XT4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AC106886.4-201ENST00000623557 2502 ntBASIC18.16■□□□□ 0.5
TRIM50Q86XT4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AC010336.2-201ENST00000564226 506 ntBASIC18.16■□□□□ 0.5
TRIM50Q86XT4 SPDYE22P-201ENST00000582158 798 ntBASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AL662799.1-202ENST00000614205 422 ntBASIC18.16■□□□□ 0.5
TRIM50Q86XT4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM50Q86XT4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 AC005052.1-201ENST00000625181 2492 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 PIN1P1-201ENST00000412108 996 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 AC104794.3-201ENST00000566840 1248 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.15■□□□□ 0.5
TRIM50Q86XT4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM50Q86XT4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.14■□□□□ 0.5
TRIM50Q86XT4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TRIM50Q86XT4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM50Q86XT4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms