Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRC28Q86X40 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRC28Q86X40 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRC28Q86X40 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LRRC28Q86X40 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AC004817.3-201ENST00000602957 2129 ntBASIC14.62□□□□□ -0.07
LRRC28Q86X40 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.62□□□□□ -0.07
LRRC28Q86X40 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 AC139887.3-201ENST00000568585 713 ntBASIC14.62□□□□□ -0.07
LRRC28Q86X40 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 BX640515.1-201ENST00000617215 977 ntBASIC14.62□□□□□ -0.07
LRRC28Q86X40 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRC28Q86X40 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRC28Q86X40 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 GGT3P-204ENST00000453783 1664 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AC067930.6-201ENST00000623257 4947 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AC009336.1-201ENST00000608941 1553 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AL590627.1-203ENST00000421194 1026 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 LAGE3P1-201ENST00000425356 484 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AL589182.2-201ENST00000619332 1049 ntBASIC14.61□□□□□ -0.07
LRRC28Q86X40 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRC28Q86X40 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRRC28Q86X40 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms