Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 AC112492.5-201ENST00000421897 457 ntBASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 SPDYE18-201ENST00000510091 1050 ntBASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 U82695.1-201ENST00000635752 1889 ntBASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC149Q6ZUS6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 AC139713.2-201ENST00000641328 2723 ntBASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC149Q6ZUS6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 MEP1AP4-201ENST00000423244 1087 ntBASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 TTTY23B-201ENST00000442790 549 ntBASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC149Q6ZUS6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms