Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 MINOS1P3-201ENST00000457048 203 ntBASIC14.35□□□□□ -0.11
C11orf88Q6PI97 AL160237.2-201ENST00000556165 472 ntBASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.35□□□□□ -0.11
C11orf88Q6PI97 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AL391256.1-201ENST00000443260 1855 ntBASIC14.34□□□□□ -0.11
C11orf88Q6PI97 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 IGHV3-47-201ENST00000425060 335 ntBASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AL353801.3-201ENST00000609898 542 ntBASIC14.34□□□□□ -0.11
C11orf88Q6PI97 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.34□□□□□ -0.11
C11orf88Q6PI97 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C11orf88Q6PI97 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms