Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AC009336.1-201ENST00000608941 1553 ntBASIC12.4□□□□□ -0.42
MRPL54Q6P161 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 RPS2P55-201ENST00000397318 883 ntBASIC12.4□□□□□ -0.42
MRPL54Q6P161 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 NEK4P2-201ENST00000580004 1012 ntBASIC12.4□□□□□ -0.42
MRPL54Q6P161 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AC020658.6-201ENST00000623564 1870 ntBASIC12.4□□□□□ -0.42
MRPL54Q6P161 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
MRPL54Q6P161 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.4□□□□□ -0.43
MRPL54Q6P161 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MRPL54Q6P161 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MRPL54Q6P161 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MRPL54Q6P161 GRK6P1-201ENST00000400595 1711 ntBASIC12.4□□□□□ -0.43
MRPL54Q6P161 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 LINC00528-201ENST00000600723 2160 ntBASIC12.39□□□□□ -0.43
MRPL54Q6P161 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
MRPL54Q6P161 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL54Q6P161 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms