Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 AC022144.1-201ENST00000602255 1580 ntBASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 LINC02560-201ENST00000596379 459 ntBASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SWSAP1Q6NVH7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 AC009477.1-201ENST00000452936 217 ntBASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 AC009407.1-201ENST00000568958 598 ntBASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 AL844908.2-201ENST00000609461 460 ntBASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 PCDHA14-201ENST00000506751 2298 ntBASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SWSAP1Q6NVH7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SWSAP1Q6NVH7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SWSAP1Q6NVH7 AL136982.4-201ENST00000437689 1740 ntBASIC18.09■□□□□ 0.49
SWSAP1Q6NVH7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.09■□□□□ 0.49
SWSAP1Q6NVH7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SWSAP1Q6NVH7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms