Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.58■□□□□ 0.09
PRAMEF17Q5VTA0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 AC236430.1-201ENST00000402231 743 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 AC098859.1-201ENST00000502915 1238 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 RNA5SP410-201ENST00000516285 106 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 AC027369.6-201ENST00000525520 931 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEF17Q5VTA0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AC093724.1-201ENST00000448659 1027 ntBASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 TSPY16P-201ENST00000449843 468 ntBASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AC007967.4-201ENST00000614700 386 ntBASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AL138828.2-201ENST00000615812 383 ntBASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AC073592.8-201ENST00000624126 511 ntBASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
PRAMEF17Q5VTA0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 FAM220BP-201ENST00000377689 816 ntBASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 MTND6P24-201ENST00000440466 518 ntBASIC15.56■□□□□ 0.08
PRAMEF17Q5VTA0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms