Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 SIGLEC16-201ENST00000599858 1437 ntBASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 AL391256.1-201ENST00000443260 1855 ntBASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHRFAM7AQ494W8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CHRFAM7AQ494W8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AL135999.2-201ENST00000622438 1686 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AC004817.3-201ENST00000602957 2129 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ACTG1P14-201ENST00000446382 1122 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AC108073.2-201ENST00000464002 357 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AP000344.2-201ENST00000512987 629 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 STK25P1-201ENST00000585406 838 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 AL049757.1-201ENST00000616842 1596 ntBASIC14.39□□□□□ -0.11
CHRFAM7AQ494W8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AC007950.2-201ENST00000615045 2347 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms