Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 AL136982.4-201ENST00000437689 1740 ntBASIC21.17■□□□□ 0.98
CCDC27Q2M243 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 OR6D1P-202ENST00000641007 5290 ntBASIC21.16■□□□□ 0.98
CCDC27Q2M243 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 SPDYE7P-202ENST00000420373 878 ntBASIC21.16■□□□□ 0.98
CCDC27Q2M243 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 AL139010.1-201ENST00000454878 894 ntBASIC21.16■□□□□ 0.98
CCDC27Q2M243 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 AL133215.2-201ENST00000609242 977 ntBASIC21.16■□□□□ 0.98
CCDC27Q2M243 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 GPALPP1-207ENST00000611650 899 ntBASIC21.16■□□□□ 0.98
CCDC27Q2M243 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC27Q2M243 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC27Q2M243 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 PCDHA1-201ENST00000378133 2726 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 AC004987.2-201ENST00000395959 1148 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 AL353705.2-201ENST00000428243 662 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 AC243562.2-201ENST00000561247 970 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 AC105021.1-202ENST00000570572 669 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC27Q2M243 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 AC022188.1-201ENST00000620960 1664 ntBASIC21.15■□□□□ 0.98
CCDC27Q2M243 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC27Q2M243 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC27Q2M243 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC27Q2M243 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC27Q2M243 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms