Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC025580.3-201ENST00000617932 1424 ntBASIC16.55■□□□□ 0.24
PRAMEP78395 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEP78395 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEP78395 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEP78395 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEP78395 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEP78395 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.55■□□□□ 0.24
PRAMEP78395 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEP78395 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEP78395 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEP78395 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.55■□□□□ 0.24
PRAMEP78395 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEP78395 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEP78395 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRAMEP78395 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 AC006449.6-201ENST00000612330 2296 ntBASIC16.54■□□□□ 0.24
PRAMEP78395 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 AC103702.1-201ENST00000548801 2630 ntBASIC16.54■□□□□ 0.24
PRAMEP78395 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRAMEP78395 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEP78395 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEP78395 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.54■□□□□ 0.24
PRAMEP78395 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEP78395 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 BX640515.1-201ENST00000617215 977 ntBASIC16.54■□□□□ 0.24
PRAMEP78395 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRAMEP78395 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRAMEP78395 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEP78395 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms