Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.94□□□□□ -0.02
CXCR4P61073 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CXCR4P61073 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.94□□□□□ -0.02
CXCR4P61073 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 ABCD1P5-201ENST00000445663 754 ntBASIC14.94□□□□□ -0.02
CXCR4P61073 AC104819.1-201ENST00000504587 486 ntBASIC14.94□□□□□ -0.02
CXCR4P61073 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.94□□□□□ -0.02
CXCR4P61073 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.94□□□□□ -0.02
CXCR4P61073 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 AC073592.4-201ENST00000623827 446 ntBASIC14.94□□□□□ -0.02
CXCR4P61073 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 AC079776.2-201ENST00000641154 1609 ntBASIC14.94□□□□□ -0.02
CXCR4P61073 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCR4P61073 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCR4P61073 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCR4P61073 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 TCAF2P1-201ENST00000291129 2421 ntBASIC14.93□□□□□ -0.02
CXCR4P61073 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCR4P61073 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CXCR4P61073 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.93□□□□□ -0.02
CXCR4P61073 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 PCED1CP-201ENST00000419887 785 ntBASIC14.93□□□□□ -0.02
CXCR4P61073 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.93□□□□□ -0.02
CXCR4P61073 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCR4P61073 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.93□□□□□ -0.02
CXCR4P61073 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCR4P61073 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.93□□□□□ -0.02
CXCR4P61073 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CXCR4P61073 AC026748.1-201ENST00000624349 3251 ntBASIC14.93□□□□□ -0.02
CXCR4P61073 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCR4P61073 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCR4P61073 PKD1P5-201ENST00000532415 10291 ntBASIC14.93□□□□□ -0.02
CXCR4P61073 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCR4P61073 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CXCR4P61073 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms