Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN20P56880 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 ACTG1P14-201ENST00000446382 1122 ntBASIC15.03■□□□□ -0
CLDN20P56880 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.03■□□□□ -0
CLDN20P56880 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.03■□□□□ -0
CLDN20P56880 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 AP002490.2-201ENST00000524791 560 ntBASIC15.03■□□□□ -0
CLDN20P56880 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.03■□□□□ -0
CLDN20P56880 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.03■□□□□ -0
CLDN20P56880 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CLDN20P56880 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 SNX33P1-201ENST00000592116 1762 ntBASIC15.03■□□□□ -0
CLDN20P56880 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN20P56880 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.03■□□□□ -0
CLDN20P56880 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CLDN20P56880 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.03■□□□□ -0
CLDN20P56880 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN20P56880 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.02■□□□□ -0
CLDN20P56880 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 PMS2P4-201ENST00000412466 1052 ntBASIC15.02■□□□□ -0
CLDN20P56880 AL355306.1-201ENST00000415580 579 ntBASIC15.02■□□□□ -0
CLDN20P56880 AC092474.2-201ENST00000424288 719 ntBASIC15.02■□□□□ -0
CLDN20P56880 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN20P56880 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.02■□□□□ -0
CLDN20P56880 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN20P56880 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.02■□□□□ -0
CLDN20P56880 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.02■□□□□ -0
CLDN20P56880 AC109635.5-201ENST00000533593 962 ntBASIC15.02■□□□□ -0
CLDN20P56880 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.02■□□□□ -0
CLDN20P56880 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
CLDN20P56880 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.02■□□□□ -0
CLDN20P56880 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
CLDN20P56880 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN20P56880 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLDN20P56880 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN20P56880 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN20P56880 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN20P56880 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN20P56880 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN20P56880 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN20P56880 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN20P56880 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 AC144831.1-201ENST00000573312 2656 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms