Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.59□□□□□ -0.07
GFRA1P56159 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.59□□□□□ -0.07
GFRA1P56159 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 TEX28P1-201ENST00000613479 1221 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 TEX28P2-201ENST00000617764 1221 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 AJ011932.1-201ENST00000621707 465 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 PCDHA14-201ENST00000506751 2298 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.58□□□□□ -0.07
GFRA1P56159 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
GFRA1P56159 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.58□□□□□ -0.08
GFRA1P56159 SPDYE17-201ENST00000412399 783 ntBASIC14.58□□□□□ -0.08
GFRA1P56159 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.58□□□□□ -0.08
GFRA1P56159 AC004890.2-204ENST00000481968 304 ntBASIC14.58□□□□□ -0.08
GFRA1P56159 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 INGX-202ENST00000489074 768 ntBASIC14.58□□□□□ -0.08
GFRA1P56159 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.58□□□□□ -0.08
GFRA1P56159 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GFRA1P56159 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.58□□□□□ -0.08
GFRA1P56159 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
GFRA1P56159 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GFRA1P56159 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.57□□□□□ -0.08
GFRA1P56159 FAM8A3P-201ENST00000427218 844 ntBASIC14.57□□□□□ -0.08
GFRA1P56159 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GFRA1P56159 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.57□□□□□ -0.08
GFRA1P56159 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.57□□□□□ -0.08
GFRA1P56159 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.57□□□□□ -0.08
GFRA1P56159 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.57□□□□□ -0.08
GFRA1P56159 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.57□□□□□ -0.08
GFRA1P56159 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.57□□□□□ -0.08
GFRA1P56159 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
GFRA1P56159 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GFRA1P56159 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms