Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH15P55291 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH15P55291 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
CDH15P55291 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH15P55291 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH15P55291 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH15P55291 AC002310.6-201ENST00000624451 1377 ntBASIC15.33■□□□□ 0.04
CDH15P55291 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH15P55291 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH15P55291 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH15P55291 LINC00265-3P-201ENST00000447588 903 ntBASIC15.32■□□□□ 0.04
CDH15P55291 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH15P55291 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH15P55291 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH15P55291 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 Z83836.1-201ENST00000624605 1642 ntBASIC15.32■□□□□ 0.04
CDH15P55291 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH15P55291 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH15P55291 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH15P55291 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 IGHGP-201ENST00000390555 1178 ntBASIC15.31■□□□□ 0.04
CDH15P55291 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDH15P55291 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 AL845331.1-201ENST00000424978 1190 ntBASIC15.31■□□□□ 0.04
CDH15P55291 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 AP000867.3-201ENST00000524675 377 ntBASIC15.31■□□□□ 0.04
CDH15P55291 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CDH15P55291 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH15P55291 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH15P55291 GPR32P1-201ENST00000601788 811 ntBASIC15.31■□□□□ 0.04
CDH15P55291 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDH15P55291 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH15P55291 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH15P55291 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH15P55291 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH15P55291 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH15P55291 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms