Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CLCN2P51788 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCN2P51788 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.89■□□□□ 0.13
CLCN2P51788 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.89■□□□□ 0.13
CLCN2P51788 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 AL391256.1-201ENST00000443260 1855 ntBASIC15.88■□□□□ 0.13
CLCN2P51788 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 AP005117.1-202ENST00000581724 1908 ntBASIC15.88■□□□□ 0.13
CLCN2P51788 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLCN2P51788 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 HCG4B-203ENST00000450128 991 ntBASIC15.88■□□□□ 0.13
CLCN2P51788 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.88■□□□□ 0.13
CLCN2P51788 HLA-J-202ENST00000469281 1241 ntBASIC15.88■□□□□ 0.13
CLCN2P51788 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.88■□□□□ 0.13
CLCN2P51788 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 AC040169.1-201ENST00000565382 521 ntBASIC15.88■□□□□ 0.13
CLCN2P51788 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CLCN2P51788 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLCN2P51788 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLCN2P51788 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN2P51788 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLCN2P51788 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 AC073347.1-201ENST00000421633 2643 ntBASIC15.87■□□□□ 0.13
CLCN2P51788 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 AL009178.2-201ENST00000597278 2719 ntBASIC15.87■□□□□ 0.13
CLCN2P51788 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.87■□□□□ 0.13
CLCN2P51788 PGAM5P1-201ENST00000518923 814 ntBASIC15.87■□□□□ 0.13
CLCN2P51788 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN2P51788 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CLCN2P51788 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 AL596087.1-201ENST00000400979 1969 ntBASIC15.87■□□□□ 0.13
CLCN2P51788 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
CLCN2P51788 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN2P51788 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN2P51788 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms