Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
UBE2AP49459 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2AP49459 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2AP49459 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2AP49459 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2AP49459 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2AP49459 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2AP49459 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2AP49459 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 TOP3BP1-201ENST00000420768 1380 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 HLA-A-202ENST00000376806 1854 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2AP49459 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 HLA-J-202ENST00000469281 1241 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
UBE2AP49459 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2AP49459 GGTLC5P-201ENST00000617623 998 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 AC004706.3-202ENST00000621574 984 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 AC012313.10-201ENST00000623509 926 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 PCDH8P1-201ENST00000428983 2773 ntBASIC10.43□□□□□ -0.74
UBE2AP49459 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
UBE2AP49459 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
UBE2AP49459 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2AP49459 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
UBE2AP49459 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2AP49459 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
UBE2AP49459 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2AP49459 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms