Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.59□□□□□ -0.07
SRP9P49458 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.59□□□□□ -0.07
SRP9P49458 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SRP9P49458 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SRP9P49458 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.58□□□□□ -0.07
SRP9P49458 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRP9P49458 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRP9P49458 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.58□□□□□ -0.07
SRP9P49458 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.58□□□□□ -0.07
SRP9P49458 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SRP9P49458 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRP9P49458 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SRP9P49458 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 AL590787.1-201ENST00000568856 1315 ntBASIC14.58□□□□□ -0.08
SRP9P49458 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SRP9P49458 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SRP9P49458 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP9P49458 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SRP9P49458 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 AP002414.1-201ENST00000391405 1147 ntBASIC14.57□□□□□ -0.08
SRP9P49458 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ELK2BP-201ENST00000415014 1224 ntBASIC14.57□□□□□ -0.08
SRP9P49458 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP9P49458 KRT18P27-201ENST00000427733 1299 ntBASIC14.57□□□□□ -0.08
SRP9P49458 FDX1P1-201ENST00000449115 551 ntBASIC14.57□□□□□ -0.08
SRP9P49458 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP9P49458 AC092910.1-201ENST00000482027 1129 ntBASIC14.57□□□□□ -0.08
SRP9P49458 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP9P49458 AC079776.4-201ENST00000511039 504 ntBASIC14.57□□□□□ -0.08
SRP9P49458 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP9P49458 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 GGTLC5P-201ENST00000617623 998 ntBASIC14.57□□□□□ -0.08
SRP9P49458 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP9P49458 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.57□□□□□ -0.08
SRP9P49458 AL805961.1-202ENST00000641562 540 ntBASIC14.57□□□□□ -0.08
SRP9P49458 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP9P49458 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SRP9P49458 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 HLA-A-201ENST00000376802 1334 ntBASIC14.57□□□□□ -0.08
SRP9P49458 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms