Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.31■□□□□ 0.36
BRCC3P46736 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.31■□□□□ 0.36
BRCC3P46736 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.31■□□□□ 0.36
BRCC3P46736 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.31■□□□□ 0.36
BRCC3P46736 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRCC3P46736 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.3■□□□□ 0.36
BRCC3P46736 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
BRCC3P46736 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.3■□□□□ 0.36
BRCC3P46736 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRCC3P46736 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 AD000864.1-201ENST00000624076 2295 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BRCC3P46736 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.3■□□□□ 0.36
BRCC3P46736 GNAQP1-201ENST00000444815 1067 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.3■□□□□ 0.36
BRCC3P46736 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.3■□□□□ 0.36
BRCC3P46736 AL365330.1-201ENST00000607459 531 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 AC004790.1-201ENST00000612686 536 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 AL033527.5-202ENST00000641632 1098 ntBASIC17.3■□□□□ 0.36
BRCC3P46736 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.3■□□□□ 0.36
BRCC3P46736 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRCC3P46736 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.29■□□□□ 0.36
BRCC3P46736 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.29■□□□□ 0.36
BRCC3P46736 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 SPDYE18-201ENST00000510091 1050 ntBASIC17.29■□□□□ 0.36
BRCC3P46736 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.29■□□□□ 0.36
BRCC3P46736 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.29■□□□□ 0.36
BRCC3P46736 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 AC239800.4-201ENST00000603712 296 ntBASIC17.29■□□□□ 0.36
BRCC3P46736 AL662799.1-202ENST00000614205 422 ntBASIC17.29■□□□□ 0.36
BRCC3P46736 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.29■□□□□ 0.36
BRCC3P46736 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.29■□□□□ 0.36
BRCC3P46736 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BRCC3P46736 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRCC3P46736 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
BRCC3P46736 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.29■□□□□ 0.36
BRCC3P46736 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.28■□□□□ 0.36
BRCC3P46736 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 CYP4F24P-201ENST00000586049 1580 ntBASIC17.28■□□□□ 0.36
BRCC3P46736 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms