Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.03■□□□□ 0.32
MMP13P45452 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP13P45452 POLD2P1-201ENST00000511220 997 ntBASIC17.03■□□□□ 0.32
MMP13P45452 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP13P45452 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.03■□□□□ 0.32
MMP13P45452 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP13P45452 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MMP13P45452 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.02■□□□□ 0.32
MMP13P45452 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.02■□□□□ 0.32
MMP13P45452 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MMP13P45452 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MMP13P45452 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.02■□□□□ 0.32
MMP13P45452 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP13P45452 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP13P45452 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
MMP13P45452 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.02■□□□□ 0.31
MMP13P45452 AP005117.1-202ENST00000581724 1908 ntBASIC17.02■□□□□ 0.31
MMP13P45452 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP13P45452 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MMP13P45452 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 GGT3P-204ENST00000453783 1664 ntBASIC17.01■□□□□ 0.31
MMP13P45452 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
MMP13P45452 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.01■□□□□ 0.31
MMP13P45452 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP13P45452 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.01■□□□□ 0.31
MMP13P45452 AL513190.1-201ENST00000621254 727 ntBASIC17.01■□□□□ 0.31
MMP13P45452 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MMP13P45452 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP13P45452 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP13P45452 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms