Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT9P35527 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT9P35527 MRPL20P1-201ENST00000400819 433 ntBASIC17.94■□□□□ 0.46
KRT9P35527 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT9P35527 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT9P35527 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT9P35527 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT9P35527 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT9P35527 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT9P35527 MIR7706-201ENST00000613747 67 ntBASIC17.94■□□□□ 0.46
KRT9P35527 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT9P35527 AC004790.2-201ENST00000623588 572 ntBASIC17.94■□□□□ 0.46
KRT9P35527 AP001350.2-201ENST00000625104 1094 ntBASIC17.94■□□□□ 0.46
KRT9P35527 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT9P35527 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KRT9P35527 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT9P35527 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT9P35527 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.93■□□□□ 0.46
KRT9P35527 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
KRT9P35527 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 AC069224.1-201ENST00000566372 1715 ntBASIC17.93■□□□□ 0.46
KRT9P35527 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT9P35527 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.93■□□□□ 0.46
KRT9P35527 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT9P35527 AC108073.2-201ENST00000464002 357 ntBASIC17.93■□□□□ 0.46
KRT9P35527 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 AC020765.3-201ENST00000613051 740 ntBASIC17.93■□□□□ 0.46
KRT9P35527 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT9P35527 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT9P35527 AC116407.3-201ENST00000623905 1129 ntBASIC17.93■□□□□ 0.46
KRT9P35527 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT9P35527 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT9P35527 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT9P35527 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT9P35527 AC009078.2-202ENST00000463353 338 ntBASIC17.92■□□□□ 0.46
KRT9P35527 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT9P35527 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT9P35527 SLC25A6P4-201ENST00000586535 553 ntBASIC17.92■□□□□ 0.46
KRT9P35527 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT9P35527 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT9P35527 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT9P35527 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms