Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.58■□□□□ 0.24
RPA3P35244 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 POU5F1P6-201ENST00000466990 990 ntBASIC16.58■□□□□ 0.24
RPA3P35244 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.58■□□□□ 0.24
RPA3P35244 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 AC092910.1-201ENST00000482027 1129 ntBASIC16.58■□□□□ 0.24
RPA3P35244 AC079776.4-201ENST00000511039 504 ntBASIC16.58■□□□□ 0.24
RPA3P35244 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.58■□□□□ 0.24
RPA3P35244 AC012640.2-201ENST00000561606 901 ntBASIC16.58■□□□□ 0.24
RPA3P35244 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.58■□□□□ 0.24
RPA3P35244 MPDU1-223ENST00000582151 728 ntBASIC16.58■□□□□ 0.24
RPA3P35244 MIR7706-201ENST00000613747 67 ntBASIC16.58■□□□□ 0.24
RPA3P35244 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.58■□□□□ 0.24
RPA3P35244 AC005593.1-201ENST00000624894 515 ntBASIC16.58■□□□□ 0.24
RPA3P35244 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
RPA3P35244 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.58■□□□□ 0.24
RPA3P35244 AP002414.3-201ENST00000589352 1468 ntBASIC16.58■□□□□ 0.24
RPA3P35244 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.58■□□□□ 0.24
RPA3P35244 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
RPA3P35244 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPA3P35244 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RPA3P35244 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RPA3P35244 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.57■□□□□ 0.24
RPA3P35244 GPAA1P2-202ENST00000606848 1787 ntBASIC16.57■□□□□ 0.24
RPA3P35244 AC069224.1-201ENST00000566372 1715 ntBASIC16.57■□□□□ 0.24
RPA3P35244 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.57■□□□□ 0.24
RPA3P35244 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RPA3P35244 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.57■□□□□ 0.24
RPA3P35244 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.57■□□□□ 0.24
RPA3P35244 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 HLA-A-201ENST00000376802 1334 ntBASIC16.57■□□□□ 0.24
RPA3P35244 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 PTCHD3P3-201ENST00000403073 906 ntBASIC16.57■□□□□ 0.24
RPA3P35244 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.57■□□□□ 0.24
RPA3P35244 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.57■□□□□ 0.24
RPA3P35244 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.57■□□□□ 0.24
RPA3P35244 AL049840.3-201ENST00000602669 611 ntBASIC16.57■□□□□ 0.24
RPA3P35244 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.57■□□□□ 0.24
RPA3P35244 PGM5P2-202ENST00000637225 1043 ntBASIC16.57■□□□□ 0.24
RPA3P35244 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.57■□□□□ 0.24
RPA3P35244 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
RPA3P35244 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.57■□□□□ 0.24
RPA3P35244 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
RPA3P35244 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPA3P35244 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 LINC01144-201ENST00000626198 1710 ntBASIC16.56■□□□□ 0.24
RPA3P35244 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.56■□□□□ 0.24
RPA3P35244 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.56■□□□□ 0.24
RPA3P35244 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.56■□□□□ 0.24
RPA3P35244 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPA3P35244 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPA3P35244 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms