Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 RNPS1P1-201ENST00000507437 918 ntBASIC17.32■□□□□ 0.36
CTNNA1P35221 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNNA1P35221 OR7E47P-204ENST00000575924 449 ntBASIC17.32■□□□□ 0.36
CTNNA1P35221 AL356488.2-201ENST00000602755 427 ntBASIC17.32■□□□□ 0.36
CTNNA1P35221 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.32■□□□□ 0.36
CTNNA1P35221 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNNA1P35221 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CTNNA1P35221 AL136379.1-201ENST00000623471 2642 ntBASIC17.32■□□□□ 0.36
CTNNA1P35221 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNNA1P35221 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CTNNA1P35221 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNNA1P35221 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.31■□□□□ 0.36
CTNNA1P35221 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 MIR1199-201ENST00000621445 119 ntBASIC17.31■□□□□ 0.36
CTNNA1P35221 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 TP73-AS1-207ENST00000624167 988 ntBASIC17.31■□□□□ 0.36
CTNNA1P35221 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNNA1P35221 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNNA1P35221 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNNA1P35221 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 CDC14C-201ENST00000428251 1719 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.3■□□□□ 0.36
CTNNA1P35221 AC018712.1-201ENST00000455767 687 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 CLEC4GP1-201ENST00000596555 870 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 PGM5P2-202ENST00000637225 1043 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.3■□□□□ 0.36
CTNNA1P35221 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 AC012569.1-201ENST00000591191 1524 ntBASIC17.3■□□□□ 0.36
CTNNA1P35221 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.3■□□□□ 0.36
CTNNA1P35221 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTNNA1P35221 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms