Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TNFSF4P23510 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TNFSF4P23510 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFSF4P23510 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFSF4P23510 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.02□□□□□ -0.16
TNFSF4P23510 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.02□□□□□ -0.16
TNFSF4P23510 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TNFSF4P23510 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TNFSF4P23510 NORAD-201ENST00000565493 5339 ntBASIC14.02□□□□□ -0.16
TNFSF4P23510 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 GGT3P-204ENST00000453783 1664 ntBASIC14.02□□□□□ -0.16
TNFSF4P23510 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFSF4P23510 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFSF4P23510 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.02□□□□□ -0.16
TNFSF4P23510 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFSF4P23510 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFSF4P23510 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFSF4P23510 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFSF4P23510 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
TNFSF4P23510 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.02□□□□□ -0.17
TNFSF4P23510 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFSF4P23510 AC027307.2-201ENST00000591252 911 ntBASIC14.02□□□□□ -0.17
TNFSF4P23510 AC022145.2-201ENST00000598203 171 ntBASIC14.02□□□□□ -0.17
TNFSF4P23510 AC055717.3-201ENST00000622967 595 ntBASIC14.02□□□□□ -0.17
TNFSF4P23510 AL513210.1-201ENST00000629608 234 ntBASIC14.02□□□□□ -0.17
TNFSF4P23510 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
TNFSF4P23510 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TNFSF4P23510 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFSF4P23510 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFSF4P23510 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
TNFSF4P23510 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 GGT4P-201ENST00000623672 1708 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFSF4P23510 KRT18P32-201ENST00000424695 1287 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 DNAJB3-202ENST00000449667 1266 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 POU5F1P6-201ENST00000466990 990 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFSF4P23510 KRT8P48-201ENST00000515599 1220 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TNFSF4P23510 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFSF4P23510 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFSF4P23510 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFSF4P23510 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.01□□□□□ -0.17
TNFSF4P23510 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms