Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.29■□□□□ 0.04
NR4A1P22736 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.29■□□□□ 0.04
NR4A1P22736 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NR4A1P22736 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.28■□□□□ 0.04
NR4A1P22736 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR4A1P22736 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NR4A1P22736 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NR4A1P22736 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.28■□□□□ 0.04
NR4A1P22736 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.28■□□□□ 0.04
NR4A1P22736 AC132008.2-207ENST00000454517 770 ntBASIC15.28■□□□□ 0.04
NR4A1P22736 EMBP1-201ENST00000458200 901 ntBASIC15.28■□□□□ 0.04
NR4A1P22736 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.28■□□□□ 0.04
NR4A1P22736 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.28■□□□□ 0.04
NR4A1P22736 REXO1L6P-202ENST00000619970 1078 ntBASIC15.28■□□□□ 0.04
NR4A1P22736 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.28■□□□□ 0.04
NR4A1P22736 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.28■□□□□ 0.04
NR4A1P22736 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR4A1P22736 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A1P22736 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
NR4A1P22736 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.27■□□□□ 0.04
NR4A1P22736 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.27■□□□□ 0.04
NR4A1P22736 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A1P22736 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NR4A1P22736 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A1P22736 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.27■□□□□ 0.04
NR4A1P22736 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A1P22736 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.27■□□□□ 0.04
NR4A1P22736 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
NR4A1P22736 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.27■□□□□ 0.03
NR4A1P22736 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
NR4A1P22736 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NR4A1P22736 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.27■□□□□ 0.03
NR4A1P22736 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
NR4A1P22736 CICP14-201ENST00000629111 2732 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms