Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 AP002414.3-201ENST00000589352 1468 ntBASIC15.23■□□□□ 0.03
TNFRSF1BP20333 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 CLEC4GP1-201ENST00000596555 870 ntBASIC15.23■□□□□ 0.03
TNFRSF1BP20333 AC008667.4-201ENST00000607370 168 ntBASIC15.23■□□□□ 0.03
TNFRSF1BP20333 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF1BP20333 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC012640.2-201ENST00000561606 901 ntBASIC15.22■□□□□ 0.03
TNFRSF1BP20333 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 OR7E47P-204ENST00000575924 449 ntBASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 IFNL4P1-201ENST00000607083 540 ntBASIC15.22■□□□□ 0.03
TNFRSF1BP20333 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AL592424.1-201ENST00000563624 1536 ntBASIC15.22■□□□□ 0.03
TNFRSF1BP20333 AC012569.1-201ENST00000591191 1524 ntBASIC15.22■□□□□ 0.03
TNFRSF1BP20333 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF1BP20333 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms