Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MCCD1P2-201ENST00000423228 335 ntBASIC16.63■□□□□ 0.25
NFKB1P19838 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.63■□□□□ 0.25
NFKB1P19838 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.63■□□□□ 0.25
NFKB1P19838 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.63■□□□□ 0.25
NFKB1P19838 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.63■□□□□ 0.25
NFKB1P19838 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.63■□□□□ 0.25
NFKB1P19838 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 NFIC-211ENST00000641145 8399 ntBASIC16.63■□□□□ 0.25
NFKB1P19838 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 AL365203.3-201ENST00000609742 2057 ntBASIC16.63■□□□□ 0.25
NFKB1P19838 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NFKB1P19838 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NFKB1P19838 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
NFKB1P19838 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.62■□□□□ 0.25
NFKB1P19838 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.62■□□□□ 0.25
NFKB1P19838 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NFKB1P19838 AC004832.2-201ENST00000426397 482 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 AL671277.1-201ENST00000429656 993 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NFKB1P19838 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 AL135744.1-201ENST00000565098 629 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NFKB1P19838 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NFKB1P19838 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 PMS2P7-201ENST00000506558 1336 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NFKB1P19838 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 AC022188.1-201ENST00000620960 1664 ntBASIC16.62■□□□□ 0.25
NFKB1P19838 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NFKB1P19838 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NFKB1P19838 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.61■□□□□ 0.25
NFKB1P19838 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
NFKB1P19838 AC007950.2-201ENST00000615045 2347 ntBASIC16.61■□□□□ 0.25
NFKB1P19838 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NFKB1P19838 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 YBX2P1-201ENST00000394192 760 ntBASIC16.61■□□□□ 0.25
NFKB1P19838 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.61■□□□□ 0.25
NFKB1P19838 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.61■□□□□ 0.25
NFKB1P19838 ADH5P3-201ENST00000433842 1137 ntBASIC16.61■□□□□ 0.25
NFKB1P19838 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
NFKB1P19838 ALG1L5P-201ENST00000482043 771 ntBASIC16.61■□□□□ 0.25
NFKB1P19838 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
NFKB1P19838 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.61■□□□□ 0.25
NFKB1P19838 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.61■□□□□ 0.25
NFKB1P19838 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.61■□□□□ 0.25
NFKB1P19838 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
NFKB1P19838 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms