Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 TTTY23B-201ENST00000442790 549 ntBASIC15.32■□□□□ 0.04
CCL4P13236 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.32■□□□□ 0.04
CCL4P13236 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.32■□□□□ 0.04
CCL4P13236 TIMM17BP1-201ENST00000545713 516 ntBASIC15.32■□□□□ 0.04
CCL4P13236 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 RAB43P1-201ENST00000561790 589 ntBASIC15.32■□□□□ 0.04
CCL4P13236 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.32■□□□□ 0.04
CCL4P13236 AC092337.1-201ENST00000568699 1129 ntBASIC15.32■□□□□ 0.04
CCL4P13236 AL365330.1-201ENST00000607459 531 ntBASIC15.32■□□□□ 0.04
CCL4P13236 AC093726.1-201ENST00000608064 963 ntBASIC15.32■□□□□ 0.04
CCL4P13236 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 AC012313.1-201ENST00000593393 3059 ntBASIC15.32■□□□□ 0.04
CCL4P13236 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL4P13236 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCL4P13236 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 FO393414.2-201ENST00000405153 598 ntBASIC15.31■□□□□ 0.04
CCL4P13236 MIR1909-201ENST00000411312 80 ntBASIC15.31■□□□□ 0.04
CCL4P13236 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.31■□□□□ 0.04
CCL4P13236 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.31■□□□□ 0.04
CCL4P13236 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 TMEM14DP-201ENST00000422205 345 ntBASIC15.31■□□□□ 0.04
CCL4P13236 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
CCL4P13236 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.31■□□□□ 0.04
CCL4P13236 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
CCL4P13236 WFDC1-204ENST00000613603 549 ntBASIC15.31■□□□□ 0.04
CCL4P13236 MIR8072-201ENST00000614241 80 ntBASIC15.31■□□□□ 0.04
CCL4P13236 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL4P13236 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL4P13236 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCL4P13236 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL4P13236 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL4P13236 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL4P13236 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 MIR658-201ENST00000385210 100 ntBASIC15.3■□□□□ 0.04
CCL4P13236 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.3■□□□□ 0.04
CCL4P13236 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 PCDHB18P-201ENST00000524813 2368 ntBASIC15.3■□□□□ 0.04
CCL4P13236 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL4P13236 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL4P13236 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms